Gene: Cre13.g578501

Overview

Common name:
Defline:(1 of 1) IPR009060//IPR015940//IPR026741//IPR026937//IPR027417 - UBA-like // Ubiquitin-associated domain // Protein strawberry notch // Strawberry notch, helicase C domain // P-loop containing nucleoside triphosphate hydrolase
Description:
Synonyms:g14212.t1
Chromosome:chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.016883_1 CLIP2.016883 intron 80 6.1
CLIP2.016883_2 CLIP2.016883 intron 80 6.1
CLIP2.029158_1 CLIP2.029158 intron 80 6.1
CLIP2.029158_2 CLIP2.029158 intron 80 6.1
CLIP2.030405_1 CLIP2.030405 intron 80 6.1
CLIP2.030405_2 CLIP2.030405 intron 80 6.1
CLIP2.035241_1 CLIP2.035241 intron 80 6.1
CLIP2.035241_2 CLIP2.035241 intron 80 6.1
CLIP2.038699_1 CLIP2.038699 intron 80 6.1
CLIP2.038699_2 CLIP2.038699 intron 80 6.1
CLIP2.054445_2 CLIP2.054445 5'UTR 80 6.1
CLIP2.054445_3 CLIP2.054445 5'UTR 80 6.1
CLIP2.074053_2 CLIP2.074053 intron 80 6.1
CLIP2.075471_2 CLIP2.075471 intron 40 6.1
LMJ.RY0402.047499_2 LMJ.RY0402.047499 intron 73 5.5
LMJ.RY0402.059943_1 LMJ.RY0402.059943 intron 73 5.5
LMJ.RY0402.065353_1 LMJ.RY0402.065353 intron 73 5.5
LMJ.RY0402.078014_1 LMJ.RY0402.078014 CDS 58 5.5
LMJ.RY0402.080701_1 LMJ.RY0402.080701 intron 73 5.5
LMJ.RY0402.089551_1 LMJ.RY0402.089551 intron 95 5.5
LMJ.RY0402.089551_2 LMJ.RY0402.089551 intron 95 5.5
LMJ.RY0402.125913_1 LMJ.RY0402.125913 intron 73 5.5
LMJ.RY0402.125975_2 LMJ.RY0402.125975 CDS 73 5.5
LMJ.RY0402.134109_1 LMJ.RY0402.134109 intron 95 5.5
LMJ.RY0402.134109_2 LMJ.RY0402.134109 intron 95 5.5
LMJ.RY0402.158226_1 LMJ.RY0402.158226 intron 95 5.5
LMJ.RY0402.158226_2 LMJ.RY0402.158226 intron 95 5.5
LMJ.RY0402.164904_1 LMJ.RY0402.164904 intron 73 5.5
LMJ.RY0402.170311_2 LMJ.RY0402.170311 intron 58 5.5
LMJ.RY0402.173971_1 LMJ.RY0402.173971 3'UTR 58 5.5
LMJ.RY0402.186728_2 LMJ.RY0402.186728 intron 73 5.5
LMJ.RY0402.193526_1 LMJ.RY0402.193526 intron 95 5.5
LMJ.RY0402.193526_2 LMJ.RY0402.193526 intron 95 5.5
LMJ.RY0402.200536_1 LMJ.RY0402.200536 CDS 73 5.5

Gene Annotations

PFAM:PF13871, PF13872
PANTHER: PTHR12706 PTHR12706:SF13
KEGG_ec:
KEGG_orthology:
KOG:KOG1513
Gene ontology terms::GO:0005515, GO:0006355
Best arabidopsis TAIR name:AT1G79350.1
Best arabidopsis TAIR symbol:EMB1135
Best arabidopsis TAIR defline:RING/FYVE/PHD zinc finger superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 1 of 4 ( 77% confidence (FDR = 0.23))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.